Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm24469-201ENSMUST00000104487 131 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm12149-201ENSMUST00000117511 654 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm11556-201ENSMUST00000120751 288 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm25665-201ENSMUST00000157695 110 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm24931-201ENSMUST00000158324 107 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm22675-201ENSMUST00000158430 104 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm23793-201ENSMUST00000179396 117 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm26180-201ENSMUST00000179942 107 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm23523-201ENSMUST00000180190 107 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm26960-201ENSMUST00000182263 412 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Mir7028-201ENSMUST00000185016 64 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm28660-201ENSMUST00000186496 253 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm20203-201ENSMUST00000192352 332 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm38076-201ENSMUST00000193889 450 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm44060-201ENSMUST00000204440 410 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm7726-201ENSMUST00000206241 231 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm19126-201ENSMUST00000207896 509 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm45236-201ENSMUST00000208632 229 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm7540-201ENSMUST00000219764 926 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm26263-201ENSMUST00000083281 164 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Gm6177-201ENSMUST00000085589 465 ntBASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Ndc1Q8VCB1 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Mir592-201ENSMUST00000102113 96 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Mir667-201ENSMUST00000102441 92 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm13321-201ENSMUST00000117101 400 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm6062-201ENSMUST00000120462 631 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm14619-201ENSMUST00000120480 168 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm12466-201ENSMUST00000121199 620 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm14761-201ENSMUST00000121363 262 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm24784-201ENSMUST00000157640 62 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm26490-201ENSMUST00000157879 140 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm24537-201ENSMUST00000157950 102 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm16114-201ENSMUST00000161930 300 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm17148-201ENSMUST00000164702 249 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm25671-201ENSMUST00000178612 105 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm23307-201ENSMUST00000179167 105 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm25361-201ENSMUST00000179358 76 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm25286-201ENSMUST00000179790 105 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm27387-201ENSMUST00000184583 116 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm9443-201ENSMUST00000188406 816 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm43115-201ENSMUST00000196244 160 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm44472-201ENSMUST00000204922 943 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm8319-201ENSMUST00000205708 641 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm45857-201ENSMUST00000212207 356 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm18442-201ENSMUST00000220925 639 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Snora52-201ENSMUST00000082732 137 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.5□□□□□ -1.69
Ndc1Q8VCB1 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ndc1Q8VCB1 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.49□□□□□ -1.69
Ndc1Q8VCB1 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ndc1Q8VCB1 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms