Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Rfx1P48377 Gm28572-201ENSMUST00000187444 318 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Gm28429-201ENSMUST00000188521 363 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.71□□□□□ -1.5
Rfx1P48377 Gm44409-201ENSMUST00000198810 166 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Gm43825-201ENSMUST00000199650 734 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.71□□□□□ -1.5
Rfx1P48377 Gm44161-201ENSMUST00000203532 253 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Gm44472-201ENSMUST00000204922 943 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Gm17989-201ENSMUST00000211543 412 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 AC154521.1-201ENSMUST00000222635 330 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Gm9202-201ENSMUST00000223036 437 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Gm5215-201ENSMUST00000054380 405 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Rfx1P48377 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Rfx1P48377 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.71□□□□□ -1.5
Rfx1P48377 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Rfx1P48377 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Rfx1P48377 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.71□□□□□ -1.5
Rfx1P48377 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Rfx1P48377 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Rfx1P48377 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Rfx1P48377 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Rfx1P48377 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Rfx1P48377 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Rfx1P48377 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Rfx1P48377 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Rfx1P48377 Gm11576-201ENSMUST00000117433 417 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm14627-201ENSMUST00000118931 567 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm13932-201ENSMUST00000120873 610 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm7308-201ENSMUST00000121087 447 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.7□□□□□ -1.5
Rfx1P48377 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 Gm16114-201ENSMUST00000161930 300 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Rfx1P48377 Gm28408-201ENSMUST00000191557 463 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 Gm10292-202ENSMUST00000193165 585 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm8874-201ENSMUST00000196826 286 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.7□□□□□ -1.5
Rfx1P48377 Olfr151-202ENSMUST00000221099 929 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm24706-201ENSMUST00000082806 137 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm24045-201ENSMUST00000083113 98 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.7□□□□□ -1.5
Rfx1P48377 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Rfx1P48377 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Rfx1P48377 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Rfx1P48377 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Rfx1P48377 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Rfx1P48377 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Rfx1P48377 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx1P48377 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Rfx1P48377 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Rfx1P48377 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rfx1P48377 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm25418-201ENSMUST00000104214 129 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm14622-201ENSMUST00000117117 468 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm13273-201ENSMUST00000119737 159 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm13557-201ENSMUST00000120771 382 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm13867-201ENSMUST00000120844 395 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.69□□□□□ -1.5
Rfx1P48377 Mir1963-201ENSMUST00000158594 59 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm23660-201ENSMUST00000178362 79 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm24088-201ENSMUST00000179100 79 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm28058-201ENSMUST00000186421 264 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm6012-201ENSMUST00000210821 730 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx1P48377 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gm26055-201ENSMUST00000083038 107 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm25821-201ENSMUST00000093657 133 ntBASIC5.69□□□□□ -1.5
Rfx1P48377 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx1P48377 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx1P48377 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx1P48377 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx1P48377 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx1P48377 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms