Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sec61bQ9CQS8 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sec61bQ9CQS8 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sec61bQ9CQS8 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sec61bQ9CQS8 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sec61bQ9CQS8 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sec61bQ9CQS8 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm37930-201ENSMUST00000194308 1886 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm43421-201ENSMUST00000200044 2905 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm23941-201ENSMUST00000101953 107 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm25564-201ENSMUST00000104604 132 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm15613-201ENSMUST00000118396 326 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm12308-201ENSMUST00000120440 389 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm13998-201ENSMUST00000120952 335 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm15223-201ENSMUST00000120989 826 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm7931-201ENSMUST00000121537 271 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm5809-201ENSMUST00000121854 529 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm13007-201ENSMUST00000121866 365 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm15096-201ENSMUST00000121918 878 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm23120-201ENSMUST00000157654 287 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm23585-201ENSMUST00000157656 102 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm24179-201ENSMUST00000158925 127 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm20480-201ENSMUST00000173953 250 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Mir3572-201ENSMUST00000175549 86 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm20698-201ENSMUST00000175657 233 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Mir6992-201ENSMUST00000183342 109 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Mir6362-201ENSMUST00000184329 107 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm28534-201ENSMUST00000187744 676 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm20257-202ENSMUST00000188643 130 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm38291-201ENSMUST00000193671 259 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Ighv1-27-201ENSMUST00000194473 340 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm37308-201ENSMUST00000194684 100 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm42776-201ENSMUST00000198031 406 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm43914-201ENSMUST00000203592 594 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm45395-201ENSMUST00000209891 559 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 AC123832.2-201ENSMUST00000215151 129 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm7422-201ENSMUST00000220115 640 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 AC124709.3-201ENSMUST00000227294 171 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm22300-201ENSMUST00000082661 126 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Gm43011-201ENSMUST00000197897 4433 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sec61bQ9CQS8 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Sec61bQ9CQS8 Gm6645-201ENSMUST00000118505 2726 ntBASIC3.28□□□□□ -1.89
Sec61bQ9CQS8 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Sec61bQ9CQS8 Gm11885-201ENSMUST00000118473 1428 ntBASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Gm43130-201ENSMUST00000197721 3907 ntBASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sec61bQ9CQS8 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms