Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm13092-201ENSMUST00000136346 260 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm23754-201ENSMUST00000157576 63 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm25224-201ENSMUST00000158195 68 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm28847-201ENSMUST00000186778 700 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm18429-201ENSMUST00000198707 421 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm46994-201ENSMUST00000221523 219 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 AL645546.1-201ENSMUST00000225001 189 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Trim28Q62318 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Olfr713-201ENSMUST00000098139 975 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Gm15095-201ENSMUST00000118996 1430 ntBASIC5.14□□□□□ -1.59
Trim28Q62318 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Trim28Q62318 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim28Q62318 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim28Q62318 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Trim28Q62318 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim28Q62318 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim28Q62318 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim28Q62318 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim28Q62318 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim28Q62318 Gm24430-201ENSMUST00000104077 104 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim28Q62318 Gm25111-201ENSMUST00000116686 147 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm11372-201ENSMUST00000117348 570 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm12102-201ENSMUST00000118251 604 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm13627-201ENSMUST00000119700 706 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm5287-201ENSMUST00000120666 598 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm13677-201ENSMUST00000120739 595 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim28Q62318 Gm26276-201ENSMUST00000157099 109 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm22059-201ENSMUST00000157544 104 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm24998-201ENSMUST00000157908 89 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm25369-201ENSMUST00000158848 132 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim28Q62318 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm22859-201ENSMUST00000174978 122 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm24418-201ENSMUST00000177597 79 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm7094-201ENSMUST00000178379 366 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm24639-201ENSMUST00000178518 79 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm23076-201ENSMUST00000179082 79 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm25077-201ENSMUST00000179157 79 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm27957-201ENSMUST00000184054 127 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm7870-201ENSMUST00000184467 616 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm17781-201ENSMUST00000195232 649 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm18327-201ENSMUST00000202426 830 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim28Q62318 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim28Q62318 Gm5649-201ENSMUST00000217918 951 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Gm7034-201ENSMUST00000218638 645 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.13□□□□□ -1.59
Trim28Q62318 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim28Q62318 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Trim28Q62318 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim28Q62318 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim28Q62318 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim28Q62318 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm15783-201ENSMUST00000117521 633 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm13737-201ENSMUST00000119793 232 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm14655-201ENSMUST00000120124 578 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm25150-201ENSMUST00000157121 60 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm23084-201ENSMUST00000157850 114 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm28974-201ENSMUST00000187893 231 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm37828-201ENSMUST00000192496 432 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm19089-201ENSMUST00000197207 613 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm43510-201ENSMUST00000197922 353 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.12□□□□□ -1.59
Trim28Q62318 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Gm46138-201ENSMUST00000215294 426 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm9845-201ENSMUST00000056409 598 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm37498-201ENSMUST00000193524 4002 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms