Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm9613-201ENSMUST00000171662 196 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm20526-201ENSMUST00000173416 158 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm22307-201ENSMUST00000180019 107 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm37869-201ENSMUST00000193385 595 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm42451-201ENSMUST00000197410 244 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm45146-201ENSMUST00000207108 221 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm45673-201ENSMUST00000210293 358 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm18997-201ENSMUST00000216353 822 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm16419-201ENSMUST00000221057 625 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm38207-201ENSMUST00000193009 3505 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf180Q3U827 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.11□□□□□ -1.59
Rnf180Q3U827 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf180Q3U827 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm23133-201ENSMUST00000104255 135 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm13356-201ENSMUST00000121678 335 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm25106-201ENSMUST00000122672 134 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm2020-201ENSMUST00000145242 579 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm24901-201ENSMUST00000158125 110 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm25861-201ENSMUST00000158251 109 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm27392-201ENSMUST00000185041 101 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm28404-201ENSMUST00000190242 453 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm19777-201ENSMUST00000191940 358 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm38008-201ENSMUST00000195333 518 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm5034-201ENSMUST00000199115 634 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm5551-201ENSMUST00000199720 690 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm44348-201ENSMUST00000200165 122 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm44923-201ENSMUST00000206673 85 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm44946-201ENSMUST00000208425 572 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm3442-201ENSMUST00000216808 710 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm22293-201ENSMUST00000083314 109 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Gm24765-201ENSMUST00000083691 103 ntBASIC5.1□□□□□ -1.59
Rnf180Q3U827 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf180Q3U827 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf180Q3U827 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf180Q3U827 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
Rnf180Q3U827 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf180Q3U827 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm7905-201ENSMUST00000119933 1386 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm6221-201ENSMUST00000180064 1386 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm8666-201ENSMUST00000117517 292 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm12683-201ENSMUST00000117528 415 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm12878-201ENSMUST00000118744 332 ntBASIC5.09□□□□□ -1.59
Rnf180Q3U827 Gm14837-201ENSMUST00000119688 206 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms