Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm21673-201ENSMUST00000186640 436 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm28163-201ENSMUST00000187099 325 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm21135-201ENSMUST00000189023 436 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm29592-201ENSMUST00000189434 370 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm42672-201ENSMUST00000197821 352 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Gm6112-201ENSMUST00000208037 629 ntBASIC5.15□□□□□ -1.59
Sox1P53783 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.15□□□□□ -1.59
Sox1P53783 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.15□□□□□ -1.59
Sox1P53783 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.15□□□□□ -1.59
Sox1P53783 CT009718.4-201ENSMUST00000221881 109 ntBASIC5.15□□□□□ -1.59
Sox1P53783 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.15□□□□□ -1.59
Sox1P53783 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.15□□□□□ -1.59
Sox1P53783 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Sox1P53783 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sox1P53783 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
Sox1P53783 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sox1P53783 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Sox1P53783 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.15□□□□□ -1.59
Sox1P53783 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sox1P53783 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Sox1P53783 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Sox1P53783 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.15□□□□□ -1.59
Sox1P53783 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Sox1P53783 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Sox1P53783 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Sox1P53783 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Gm23941-201ENSMUST00000101953 107 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Gm22831-201ENSMUST00000102473 109 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sox1P53783 Gm15195-201ENSMUST00000118775 263 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Gm15603-201ENSMUST00000119252 492 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Gm24505-201ENSMUST00000157682 126 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Mir713-201ENSMUST00000178651 108 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sox1P53783 Gm29489-201ENSMUST00000188934 324 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Gm32033-201ENSMUST00000193483 339 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Gm9442-201ENSMUST00000194242 319 ntBASIC5.14□□□□□ -1.59
Sox1P53783 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Gm10237-201ENSMUST00000078393 273 ntBASIC5.14□□□□□ -1.59
Sox1P53783 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sox1P53783 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.14□□□□□ -1.59
Sox1P53783 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Sox1P53783 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.14□□□□□ -1.59
Sox1P53783 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sox1P53783 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Sox1P53783 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Sox1P53783 Gm23594-201ENSMUST00000104307 134 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm15211-201ENSMUST00000118932 528 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.13□□□□□ -1.59
Sox1P53783 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.13□□□□□ -1.59
Sox1P53783 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.13□□□□□ -1.59
Sox1P53783 Gm23391-201ENSMUST00000157579 104 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm24186-201ENSMUST00000157983 127 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm8292-201ENSMUST00000162574 396 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm24819-201ENSMUST00000175094 166 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Sox1P53783 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Sox1P53783 Gm24520-201ENSMUST00000179510 110 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm28399-201ENSMUST00000186221 318 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm28572-201ENSMUST00000187444 318 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm29365-201ENSMUST00000189461 699 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm7449-201ENSMUST00000194393 663 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm43407-201ENSMUST00000199816 317 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm42458-201ENSMUST00000201914 369 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm44779-201ENSMUST00000206937 708 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.13□□□□□ -1.59
Sox1P53783 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.13□□□□□ -1.59
Sox1P53783 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.13□□□□□ -1.59
Sox1P53783 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Gm21937-201ENSMUST00000222825 218 ntBASIC5.13□□□□□ -1.59
Sox1P53783 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Sox1P53783 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms