Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm17811-201ENSMUST00000206193 387 ntBASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm18442-201ENSMUST00000220925 639 ntBASIC4.81□□□□□ -1.64
Ssu72Q9CY97 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm6065-201ENSMUST00000081336 492 ntBASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Snora52-201ENSMUST00000082732 137 ntBASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Gm23645-201ENSMUST00000083228 108 ntBASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ssu72Q9CY97 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm11912-201ENSMUST00000117235 264 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm11790-201ENSMUST00000119569 455 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm22843-201ENSMUST00000157710 134 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm22210-201ENSMUST00000158101 144 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Mir5099-201ENSMUST00000175257 74 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm24300-201ENSMUST00000177809 109 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm22852-201ENSMUST00000177899 101 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm24017-201ENSMUST00000178726 109 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm23952-201ENSMUST00000179380 109 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Mir6393-201ENSMUST00000183709 94 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm19206-201ENSMUST00000186401 827 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm28996-201ENSMUST00000190316 721 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm29332-201ENSMUST00000190829 227 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm42666-201ENSMUST00000201954 152 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm29884-201ENSMUST00000218403 453 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm25937-201ENSMUST00000083912 107 ntBASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ssu72Q9CY97 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Mir599-201ENSMUST00000102378 88 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm13867-201ENSMUST00000120844 395 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm11582-201ENSMUST00000121041 236 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm12693-201ENSMUST00000121965 483 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm23463-201ENSMUST00000122468 99 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm3362-201ENSMUST00000148102 466 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm26347-201ENSMUST00000157526 131 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm5258-201ENSMUST00000165437 327 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Mir5624-201ENSMUST00000176635 61 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm24968-201ENSMUST00000179817 107 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm43415-201ENSMUST00000201934 750 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm44853-201ENSMUST00000209070 250 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm45252-201ENSMUST00000211579 397 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm9318-201ENSMUST00000222444 438 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Gm23412-201ENSMUST00000083017 107 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.79□□□□□ -1.64
Ssu72Q9CY97 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms