Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Snx32-201ENSMUST00000070172 1650 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Dpy19l4-201ENSMUST00000084892 6754 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Gm4559A4IF42 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Cnr2-201ENSMUST00000068830 3756 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Vill-201ENSMUST00000051386 2909 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Slc4a11-201ENSMUST00000099362 3196 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Kcnh6-201ENSMUST00000001965 3368 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC1.03□□□□□ -2.24
Gm4559A4IF42 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms