Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm4321-201ENSMUST00000200520 442 ntBASIC5.77□□□□□ -1.49
Cln3Q61124 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.77□□□□□ -1.49
Cln3Q61124 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.77□□□□□ -1.49
Cln3Q61124 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Cln3Q61124 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.77□□□□□ -1.49
Cln3Q61124 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.77□□□□□ -1.49
Cln3Q61124 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cln3Q61124 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cln3Q61124 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cln3Q61124 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cln3Q61124 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.76□□□□□ -1.49
Cln3Q61124 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Cln3Q61124 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cln3Q61124 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Cln3Q61124 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.76□□□□□ -1.49
Cln3Q61124 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm15297-201ENSMUST00000117795 290 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm11447-201ENSMUST00000118983 858 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm12118-201ENSMUST00000119766 532 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm13967-201ENSMUST00000120404 380 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm11384-201ENSMUST00000121376 303 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm25624-201ENSMUST00000157222 275 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm22849-201ENSMUST00000157713 307 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm23277-201ENSMUST00000157914 136 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm24217-201ENSMUST00000158260 133 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm25360-201ENSMUST00000178786 191 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm28255-201ENSMUST00000187101 694 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm8939-201ENSMUST00000192577 964 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm10048-201ENSMUST00000194196 372 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.76□□□□□ -1.49
Cln3Q61124 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm44720-201ENSMUST00000206076 260 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Mir27a-201ENSMUST00000083510 87 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm12080-201ENSMUST00000119821 1883 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.76□□□□□ -1.49
Cln3Q61124 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Smc5-206ENSMUST00000226111 3265 ntBASIC5.76□□□□□ -1.49
Cln3Q61124 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.76□□□□□ -1.49
Cln3Q61124 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cln3Q61124 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cln3Q61124 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Gm23142-201ENSMUST00000101848 105 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm26240-201ENSMUST00000101893 105 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm23422-201ENSMUST00000102000 107 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Gm14868-201ENSMUST00000117840 216 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm12647-201ENSMUST00000118977 265 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm12956-201ENSMUST00000122184 414 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm17183-201ENSMUST00000171170 493 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm24968-201ENSMUST00000179817 107 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.75□□□□□ -1.49
Cln3Q61124 Gm28097-201ENSMUST00000187333 366 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm28921-201ENSMUST00000190219 378 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm7837-201ENSMUST00000190873 412 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Gm42665-201ENSMUST00000202100 586 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cln3Q61124 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5.75□□□□□ -1.49
Cln3Q61124 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Gm22220-201ENSMUST00000082671 149 ntBASIC5.75□□□□□ -1.49
Cln3Q61124 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Cln3Q61124 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms