Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col8a1Q00780 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col8a1Q00780 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm25419-201ENSMUST00000104215 191 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm23744-201ENSMUST00000104231 149 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm23593-201ENSMUST00000104309 120 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm25726-201ENSMUST00000104529 129 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm11270-201ENSMUST00000117685 471 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm15994-201ENSMUST00000118029 402 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm11699-201ENSMUST00000119016 401 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm15357-201ENSMUST00000119160 285 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm23213-201ENSMUST00000122715 313 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm22116-201ENSMUST00000158791 141 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm17148-201ENSMUST00000164702 249 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm26430-201ENSMUST00000178054 107 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col8a1Q00780 Mir6416-201ENSMUST00000183664 117 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm8600-201ENSMUST00000186320 905 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm37503-201ENSMUST00000192088 319 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm44322-201ENSMUST00000196830 115 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm44011-201ENSMUST00000203336 394 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm45105-201ENSMUST00000207824 397 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.28□□□□□ -1.72
Col8a1Q00780 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm18442-201ENSMUST00000220925 639 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Col8a1Q00780 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col8a1Q00780 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.28□□□□□ -1.72
Col8a1Q00780 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col8a1Q00780 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Smc5-206ENSMUST00000226111 3265 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Mir761-201ENSMUST00000103245 76 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm14652-201ENSMUST00000118479 235 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm11313-201ENSMUST00000118779 432 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm11790-201ENSMUST00000119569 455 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm6584-201ENSMUST00000119671 447 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm12771-201ENSMUST00000120246 135 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm24504-201ENSMUST00000157679 100 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm24745-201ENSMUST00000157840 85 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm23964-201ENSMUST00000157966 107 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm6872-201ENSMUST00000165001 700 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm22307-201ENSMUST00000180019 107 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Mir6401-201ENSMUST00000184499 109 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm28957-201ENSMUST00000190174 373 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm9134-201ENSMUST00000193186 551 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms