Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm43169-201ENSMUST00000199544 4734 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm23193-201ENSMUST00000102427 82 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Mir667-201ENSMUST00000102441 92 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm13510-201ENSMUST00000118659 429 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm12190-201ENSMUST00000120001 187 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm15112-201ENSMUST00000120152 860 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm12876-201ENSMUST00000120975 408 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm11430-201ENSMUST00000121317 217 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm24546-201ENSMUST00000158652 102 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm23312-201ENSMUST00000158774 102 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm16490-201ENSMUST00000165299 351 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm27690-201ENSMUST00000184596 126 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm38185-201ENSMUST00000193195 694 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm19252-201ENSMUST00000204705 305 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm6988-201ENSMUST00000222676 375 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm22423-201ENSMUST00000082861 184 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm25410-201ENSMUST00000083758 137 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nkx6-1Q99MA9 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Smc5-206ENSMUST00000226111 3265 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm22831-201ENSMUST00000102473 109 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm5757-201ENSMUST00000117494 528 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm15267-201ENSMUST00000120888 464 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm13511-201ENSMUST00000121167 363 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm25103-201ENSMUST00000122671 318 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm26034-201ENSMUST00000158154 116 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm16569-201ENSMUST00000160526 314 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm23047-201ENSMUST00000177661 94 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Mir6391-201ENSMUST00000184391 104 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm27564-201ENSMUST00000185196 96 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm21673-201ENSMUST00000186640 436 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm29064-201ENSMUST00000187014 813 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm21135-201ENSMUST00000189023 436 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm28957-201ENSMUST00000190174 373 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm37503-201ENSMUST00000192088 319 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm44108-201ENSMUST00000203525 422 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm44765-201ENSMUST00000206927 601 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm44655-201ENSMUST00000207768 423 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm45523-201ENSMUST00000210712 799 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms