Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm24715-201ENSMUST00000102377 95 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Mir193b-201ENSMUST00000103784 79 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14086-201ENSMUST00000117152 173 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14560-201ENSMUST00000118672 375 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm7312-201ENSMUST00000118798 469 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25341-201ENSMUST00000157461 268 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23779-201ENSMUST00000157938 64 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm29475-201ENSMUST00000190767 312 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm3010-201ENSMUST00000198805 448 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm2623-201ENSMUST00000199229 286 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm42458-201ENSMUST00000201914 369 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm18791-201ENSMUST00000204611 726 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm45395-201ENSMUST00000209891 559 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm26228-201ENSMUST00000082512 107 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25080-201ENSMUST00000082526 107 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm26439-201ENSMUST00000082592 106 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25134-201ENSMUST00000082646 160 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25518-201ENSMUST00000083864 107 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm24429-201ENSMUST00000104076 132 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Mir879-201ENSMUST00000104703 76 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm12255-201ENSMUST00000117184 284 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm11781-201ENSMUST00000118328 472 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23327-201ENSMUST00000157420 78 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm22843-201ENSMUST00000157710 134 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23318-201ENSMUST00000158000 108 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm22290-201ENSMUST00000177655 107 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm22583-201ENSMUST00000178031 107 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Snora23-201ENSMUST00000082517 184 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23939-201ENSMUST00000082880 133 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23508-201ENSMUST00000083079 72 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Mir342-201ENSMUST00000083502 99 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Gm15102-201ENSMUST00000118740 1502 ntBASIC5.13□□□□□ -1.59
Sh3rf1Q69ZI1 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14771-201ENSMUST00000118249 203 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14013-201ENSMUST00000119006 270 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm8217-201ENSMUST00000119136 465 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm12137-201ENSMUST00000119565 346 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm13518-201ENSMUST00000120018 233 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14049-201ENSMUST00000121009 636 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm13406-201ENSMUST00000121991 256 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm11229-201ENSMUST00000121993 437 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm15147-201ENSMUST00000122263 483 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms