Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clcn1Q64347 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Clcn1Q64347 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clcn1Q64347 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Clcn1Q64347 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clcn1Q64347 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clcn1Q64347 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm24170-201ENSMUST00000104124 133 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm11561-201ENSMUST00000117429 417 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm11447-201ENSMUST00000118983 858 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm14298-201ENSMUST00000139032 237 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm16356-201ENSMUST00000143300 169 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm25865-201ENSMUST00000158247 104 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Mir3964-201ENSMUST00000174898 74 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm24464-201ENSMUST00000179697 107 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm29227-201ENSMUST00000187139 315 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm29034-201ENSMUST00000188099 315 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm37128-201ENSMUST00000192599 232 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm37129-201ENSMUST00000195791 315 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm44609-201ENSMUST00000207157 460 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Gm35857-201ENSMUST00000212739 178 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 CT009718.4-201ENSMUST00000221881 109 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 AC129541.1-201ENSMUST00000226940 523 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clcn1Q64347 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clcn1Q64347 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clcn1Q64347 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clcn1Q64347 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Clcn1Q64347 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clcn1Q64347 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clcn1Q64347 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.73□□□□□ -1.33
Clcn1Q64347 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm18913-201ENSMUST00000204311 1789 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clcn1Q64347 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC6.72□□□□□ -1.33
Clcn1Q64347 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm15981-201ENSMUST00000119196 457 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm14940-201ENSMUST00000119309 495 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm15112-201ENSMUST00000120152 860 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm22337-201ENSMUST00000157721 132 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm22537-201ENSMUST00000158172 199 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm22160-201ENSMUST00000158405 328 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm24577-201ENSMUST00000158580 63 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm24675-201ENSMUST00000158757 259 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm20203-201ENSMUST00000192352 332 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.72□□□□□ -1.33
Clcn1Q64347 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm45200-201ENSMUST00000207434 919 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.72□□□□□ -1.33
Clcn1Q64347 AC141884.1-201ENSMUST00000226327 636 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm25081-201ENSMUST00000082534 108 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm23721-201ENSMUST00000083005 107 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Gm23460-201ENSMUST00000083258 109 ntBASIC6.72□□□□□ -1.33
Clcn1Q64347 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Clcn1Q64347 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clcn1Q64347 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Clcn1Q64347 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
Clcn1Q64347 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Clcn1Q64347 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clcn1Q64347 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.71□□□□□ -1.33
Clcn1Q64347 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Clcn1Q64347 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clcn1Q64347 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clcn1Q64347 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Clcn1Q64347 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clcn1Q64347 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Clcn1Q64347 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Clcn1Q64347 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Clcn1Q64347 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Clcn1Q64347 Gm22266-201ENSMUST00000104011 138 ntBASIC6.71□□□□□ -1.34
Clcn1Q64347 Snord98-201ENSMUST00000116819 65 ntBASIC6.71□□□□□ -1.34
Clcn1Q64347 Gm23879-201ENSMUST00000116874 126 ntBASIC6.71□□□□□ -1.34
Clcn1Q64347 Gm12683-201ENSMUST00000117528 415 ntBASIC6.71□□□□□ -1.34
Clcn1Q64347 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms