Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.65□□□□□ -1.99
RTRAFQ9CQE8 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm11898-201ENSMUST00000117161 385 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm13614-201ENSMUST00000117306 503 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm9009-201ENSMUST00000117321 326 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm14971-201ENSMUST00000117980 663 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm25047-201ENSMUST00000122667 104 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm25807-201ENSMUST00000122783 305 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Mir7006-201ENSMUST00000183624 69 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm28552-201ENSMUST00000190725 388 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm30280-201ENSMUST00000192214 262 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm42976-201ENSMUST00000200313 222 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm44513-201ENSMUST00000206811 439 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 CT030242.2-201ENSMUST00000221588 148 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Snord22-201ENSMUST00000083153 126 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm44434-201ENSMUST00000203918 3745 ntBASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RTRAFQ9CQE8 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm14518-201ENSMUST00000117351 542 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm5757-201ENSMUST00000117494 528 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm12722-201ENSMUST00000118507 493 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm12213-201ENSMUST00000119924 353 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm11233-201ENSMUST00000122357 634 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm22480-201ENSMUST00000122568 128 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm24773-201ENSMUST00000158513 99 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm16290-201ENSMUST00000161175 474 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm22693-201ENSMUST00000175049 442 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm38201-201ENSMUST00000192143 387 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm44952-201ENSMUST00000204443 433 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm17766-201ENSMUST00000209223 442 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm18602-201ENSMUST00000209794 851 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm6929-201ENSMUST00000210930 468 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm17872-201ENSMUST00000222550 532 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 AC158955.1-201ENSMUST00000227140 385 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.63□□□□□ -1.99
RTRAFQ9CQE8 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Mir592-201ENSMUST00000102113 96 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm11881-201ENSMUST00000119408 572 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm13717-201ENSMUST00000119868 365 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm12691-201ENSMUST00000120186 456 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm15488-201ENSMUST00000121682 670 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm15116-201ENSMUST00000122248 663 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Scarna6-201ENSMUST00000158656 265 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm24875-201ENSMUST00000158888 104 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm23365-201ENSMUST00000175019 125 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm25960-201ENSMUST00000175110 125 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm44453-201ENSMUST00000175161 126 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Gm25195-201ENSMUST00000177656 126 ntBASIC2.62□□□□□ -1.99
RTRAFQ9CQE8 Mir713-201ENSMUST00000178651 108 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms