Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm28468-201ENSMUST00000188536 615 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm20923-201ENSMUST00000190009 319 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm5285-201ENSMUST00000193089 666 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm10048-201ENSMUST00000194196 372 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm43355-201ENSMUST00000196541 346 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm6012-201ENSMUST00000210821 730 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm18016-201ENSMUST00000216119 801 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Mir20a-201ENSMUST00000083508 107 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Clp1Q99LI9 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Clp1Q99LI9 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm17976-201ENSMUST00000184037 1909 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm12466-201ENSMUST00000121199 620 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm11363-201ENSMUST00000121672 548 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm15147-201ENSMUST00000122263 483 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm4916-201ENSMUST00000126139 642 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm22675-201ENSMUST00000158430 104 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21842-201ENSMUST00000177552 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21626-201ENSMUST00000177791 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21562-201ENSMUST00000177888 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21539-201ENSMUST00000177925 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21599-201ENSMUST00000178249 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21914-201ENSMUST00000178452 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21723-201ENSMUST00000178692 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21916-201ENSMUST00000178771 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21801-201ENSMUST00000178865 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21633-201ENSMUST00000178941 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21821-201ENSMUST00000179646 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21588-201ENSMUST00000180074 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21780-201ENSMUST00000180128 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21572-201ENSMUST00000180134 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm21529-201ENSMUST00000180175 498 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm29370-202ENSMUST00000187476 499 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Mir6516-201ENSMUST00000196236 110 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm19252-201ENSMUST00000204705 305 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm45252-201ENSMUST00000211579 397 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Mir452-201ENSMUST00000093629 85 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm381-201ENSMUST00000117443 2037 ntBASIC5.5□□□□□ -1.53
Clp1Q99LI9 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Clp1Q99LI9 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Clp1Q99LI9 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Clp1Q99LI9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm23577-201ENSMUST00000103950 110 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm15752-201ENSMUST00000117427 394 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm15148-201ENSMUST00000117602 156 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm15168-201ENSMUST00000121057 316 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
Clp1Q99LI9 Gm22668-201ENSMUST00000158716 260 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms