Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Gm5538W4VSP6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5538W4VSP6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5538W4VSP6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Mir5122-201ENSMUST00000175004 89 ntBASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5538W4VSP6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5538W4VSP6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Gm38027-201ENSMUST00000192315 235 ntBASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5538W4VSP6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms