Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb3S4R1G7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb3S4R1G7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb3S4R1G7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb3S4R1G7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Gm11927-201ENSMUST00000118472 759 ntBASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb3S4R1G7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb3S4R1G7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.56■□□□□ 0.08
H2afb3S4R1G7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
H2afb3S4R1G7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Mir8112-201ENSMUST00000184382 131 ntBASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Gm2559-201ENSMUST00000201323 363 ntBASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb3S4R1G7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Mir2861-201ENSMUST00000175539 82 ntBASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb3S4R1G7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms