Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1h3Q9Z0Y9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm27389-201ENSMUST00000183622 195 ntBASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1h3Q9Z0Y9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm37025-201ENSMUST00000195159 829 ntBASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1h3Q9Z0Y9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nr1h3Q9Z0Y9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Nr1h3Q9Z0Y9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.76■□□□□ 0.59
Nr1h3Q9Z0Y9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1h3Q9Z0Y9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1h3Q9Z0Y9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1h3Q9Z0Y9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nr1h3Q9Z0Y9 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms