Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Trmt13-210ENSMUST00000198454 880 ntBASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps29Q9QZ88 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps29Q9QZ88 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps29Q9QZ88 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps29Q9QZ88 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps29Q9QZ88 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps29Q9QZ88 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps29Q9QZ88 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps29Q9QZ88 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Gm37292-201ENSMUST00000192062 758 ntBASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vps29Q9QZ88 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Gm12382-201ENSMUST00000122005 922 ntBASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Vps29Q9QZ88 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms