Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm10138-203ENSMUST00000206952 366 ntBASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.97■□□□□ 0.63
Copb1Q9JIF7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Gm2559-201ENSMUST00000201323 363 ntBASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb1Q9JIF7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Dio3-201ENSMUST00000097228 1449 ntBASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Copb1Q9JIF7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Gm15375-201ENSMUST00000119510 849 ntBASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb1Q9JIF7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb1Q9JIF7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Gm6576-201ENSMUST00000169678 883 ntBASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb1Q9JIF7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 177 ms