Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a3Q9D554 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a3Q9D554 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sf3a3Q9D554 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Sf3a3Q9D554 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sf3a3Q9D554 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a3Q9D554 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a3Q9D554 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.62■□□□□ 0.41
Sf3a3Q9D554 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a3Q9D554 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Gm12922-201ENSMUST00000120626 809 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms