Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lysmd1Q9D0E3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lysmd1Q9D0E3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Gm8396-201ENSMUST00000057361 823 ntBASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lysmd1Q9D0E3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lysmd1Q9D0E3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Gm13036-201ENSMUST00000117799 748 ntBASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lysmd1Q9D0E3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Gm13616-201ENSMUST00000120600 222 ntBASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lysmd1Q9D0E3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Gm4535-201ENSMUST00000182274 558 ntBASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Mir8117-201ENSMUST00000184773 107 ntBASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Gm6550-201ENSMUST00000187574 993 ntBASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Gm10355-201ENSMUST00000097146 517 ntBASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.54■□□□□ 0.56
Lysmd1Q9D0E3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Gm14127-201ENSMUST00000117906 678 ntBASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lysmd1Q9D0E3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lysmd1Q9D0E3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lysmd1Q9D0E3 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.52■□□□□ 0.55
Lysmd1Q9D0E3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lysmd1Q9D0E3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.52■□□□□ 0.55
Lysmd1Q9D0E3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms