Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Gm44549-201ENSMUST00000208351 577 ntBASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr1Q9CY50 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ssr1Q9CY50 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Gm5408-201ENSMUST00000197998 747 ntBASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Gm8969-201ENSMUST00000199694 526 ntBASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr1Q9CY50 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Gm38285-201ENSMUST00000192928 922 ntBASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssr1Q9CY50 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Rab3c-203ENSMUST00000224180 967 ntBASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms