Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
Ddx47Q9CWX9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.86■□□□□ 0.45
Ddx47Q9CWX9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ddx47Q9CWX9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx47Q9CWX9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx47Q9CWX9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.85■□□□□ 0.45
Ddx47Q9CWX9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx47Q9CWX9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx47Q9CWX9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx47Q9CWX9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx47Q9CWX9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx47Q9CWX9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx47Q9CWX9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.83■□□□□ 0.45
Ddx47Q9CWX9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Ddx47Q9CWX9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx47Q9CWX9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx47Q9CWX9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms