Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc3Q9CWU5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Gm6576-201ENSMUST00000169678 883 ntBASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc3Q9CWU5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Mir8112-201ENSMUST00000184382 131 ntBASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.6■□□□□ 0.25
Khdc3Q9CWU5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Gm5643-201ENSMUST00000117081 966 ntBASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Khdc3Q9CWU5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc3Q9CWU5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc3Q9CWU5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Khdc3Q9CWU5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms