Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Gm27525-201ENSMUST00000184465 107 ntBASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldnd1Q9CQX5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldnd1Q9CQX5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldnd1Q9CQX5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.7■□□□□ 0.42
Cldnd1Q9CQX5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldnd1Q9CQX5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Notumos-201ENSMUST00000151998 2659 ntBASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldnd1Q9CQX5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Gm11336-201ENSMUST00000118168 334 ntBASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd1Q9CQX5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms