Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Mir8112-201ENSMUST00000184382 131 ntBASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rer1Q9CQU3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Gm2559-201ENSMUST00000201323 363 ntBASIC14.19□□□□□ -0.14
Rer1Q9CQU3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Gm4968-201ENSMUST00000071458 858 ntBASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rer1Q9CQU3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rer1Q9CQU3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Rer1Q9CQU3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.16□□□□□ -0.14
Rer1Q9CQU3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Gm13401-201ENSMUST00000117074 291 ntBASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Gm10602-201ENSMUST00000098239 609 ntBASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rer1Q9CQU3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms