Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Gm37856-201ENSMUST00000191634 999 ntBASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Trmt13-210ENSMUST00000198454 880 ntBASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim11Q99PQ2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim11Q99PQ2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.7■□□□□ 0.74
Trim11Q99PQ2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim11Q99PQ2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Gm12382-201ENSMUST00000122005 922 ntBASIC19.69■□□□□ 0.74
Trim11Q99PQ2 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.69■□□□□ 0.74
Trim11Q99PQ2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim11Q99PQ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.68■□□□□ 0.74
Trim11Q99PQ2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms