Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim33Q99PP7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Gm6576-201ENSMUST00000169678 883 ntBASIC17.14■□□□□ 0.33
Trim33Q99PP7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim33Q99PP7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim33Q99PP7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim33Q99PP7 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.12■□□□□ 0.33
Trim33Q99PP7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.12■□□□□ 0.33
Trim33Q99PP7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim33Q99PP7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.11■□□□□ 0.33
Trim33Q99PP7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.11■□□□□ 0.33
Trim33Q99PP7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim33Q99PP7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms