Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Gm25911-201ENSMUST00000157621 56 ntBASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh23Q99PF4 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh23Q99PF4 Gm12644-201ENSMUST00000119935 606 ntBASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Gm7862-201ENSMUST00000121461 292 ntBASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh23Q99PF4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh23Q99PF4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Gm2213-201ENSMUST00000197485 688 ntBASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Gm14057-201ENSMUST00000120631 482 ntBASIC17.66■□□□□ 0.42
Cdh23Q99PF4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh23Q99PF4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Psmb5-202ENSMUST00000227257 622 ntBASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms