Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Gm15920-201ENSMUST00000118998 402 ntBASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col25a1Q99MQ5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Col25a1Q99MQ5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Gm14822-201ENSMUST00000122247 291 ntBASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col25a1Q99MQ5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col25a1Q99MQ5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Gm27321-201ENSMUST00000185021 205 ntBASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Col25a1Q99MQ5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms