Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Gm27459-201ENSMUST00000184860 107 ntBASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Gm43347-201ENSMUST00000200226 580 ntBASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx6-1Q99MA9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Nkx6-1Q99MA9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx6-1Q99MA9 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nkx6-1Q99MA9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Gm11452-201ENSMUST00000122376 690 ntBASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms