Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd2Q99JR8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Gm7461-201ENSMUST00000058918 827 ntBASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd2Q99JR8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd2Q99JR8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd2Q99JR8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd2Q99JR8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smarcd2Q99JR8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms