Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Gm13401-201ENSMUST00000117074 291 ntBASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Gm10653-202ENSMUST00000139570 835 ntBASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Mir8112-201ENSMUST00000184382 131 ntBASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha8Q91Y12 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Gm5643-201ENSMUST00000117081 966 ntBASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha8Q91Y12 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdha8Q91Y12 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Pcdha8Q91Y12 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha8Q91Y12 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Gm42545-201ENSMUST00000202755 922 ntBASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha8Q91Y12 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Gm6576-201ENSMUST00000169678 883 ntBASIC16.82■□□□□ 0.28
Pcdha8Q91Y12 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms