Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Gm34391-201ENSMUST00000203706 907 ntBASIC17.11■□□□□ 0.33
Vsx1Q91V10 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.1■□□□□ 0.33
Vsx1Q91V10 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.1■□□□□ 0.33
Vsx1Q91V10 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx1Q91V10 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.09■□□□□ 0.33
Vsx1Q91V10 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Gm27742-201ENSMUST00000184667 60 ntBASIC17.09■□□□□ 0.33
Vsx1Q91V10 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx1Q91V10 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vsx1Q91V10 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.08■□□□□ 0.33
Vsx1Q91V10 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vsx1Q91V10 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.08■□□□□ 0.32
Vsx1Q91V10 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx1Q91V10 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.07■□□□□ 0.32
Vsx1Q91V10 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.07■□□□□ 0.32
Vsx1Q91V10 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.07■□□□□ 0.32
Vsx1Q91V10 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx1Q91V10 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms