Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.43■□□□□ 0.54
TraipQ8VIG6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Gm11355-201ENSMUST00000121120 306 ntBASIC18.42■□□□□ 0.54
TraipQ8VIG6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TraipQ8VIG6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.41■□□□□ 0.54
TraipQ8VIG6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Gm26039-201ENSMUST00000158152 144 ntBASIC18.41■□□□□ 0.54
TraipQ8VIG6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TraipQ8VIG6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TraipQ8VIG6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TraipQ8VIG6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TraipQ8VIG6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.39■□□□□ 0.53
TraipQ8VIG6 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.39■□□□□ 0.53
TraipQ8VIG6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.39■□□□□ 0.53
TraipQ8VIG6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TraipQ8VIG6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms