Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 Idnk-204ENSMUST00000226010 1898 ntBASIC16.9■□□□□ 0.3
Cdhr1Q8VHP6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cdhr1Q8VHP6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdhr1Q8VHP6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdhr1Q8VHP6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Gm13474-201ENSMUST00000122466 815 ntBASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Gm7370-201ENSMUST00000219471 767 ntBASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr1Q8VHP6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Gm6345-202ENSMUST00000180900 204 ntBASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr1Q8VHP6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Il3ra-202ENSMUST00000223589 738 ntBASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Gm10819-201ENSMUST00000099988 561 ntBASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdhr1Q8VHP6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr1Q8VHP6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr1Q8VHP6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms