Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.93■□□□□ 0.3
Q8VDP2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.93■□□□□ 0.3
Q8VDP2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.93■□□□□ 0.3
Q8VDP2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Q8VDP2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Q8VDP2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Q8VDP2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Q8VDP2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Q8VDP2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.92■□□□□ 0.3
Q8VDP2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q8VDP2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Q8VDP2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Q8VDP2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Q8VDP2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.91■□□□□ 0.3
Q8VDP2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.91■□□□□ 0.3
Q8VDP2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.91■□□□□ 0.3
Q8VDP2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.91■□□□□ 0.3
Q8VDP2 Gm21956-201ENSMUST00000179946 522 ntBASIC16.91■□□□□ 0.3
Q8VDP2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Q8VDP2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Q8VDP2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q8VDP2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Q8VDP2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.9■□□□□ 0.3
Q8VDP2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.9■□□□□ 0.3
Q8VDP2 Golgb1-201ENSMUST00000023534 498 ntBASIC16.9■□□□□ 0.3
Q8VDP2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Q8VDP2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Q8VDP2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q8VDP2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.89■□□□□ 0.3
Q8VDP2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.89■□□□□ 0.3
Q8VDP2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.89■□□□□ 0.3
Q8VDP2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.89■□□□□ 0.29
Q8VDP2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.89■□□□□ 0.29
Q8VDP2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Q8VDP2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Q8VDP2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.89■□□□□ 0.29
Q8VDP2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.89■□□□□ 0.29
Q8VDP2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.89■□□□□ 0.29
Q8VDP2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q8VDP2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms