Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a20aQ8VDB9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20aQ8VDB9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a20aQ8VDB9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a20aQ8VDB9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a20aQ8VDB9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a20aQ8VDB9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a20aQ8VDB9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20aQ8VDB9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20aQ8VDB9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.06■□□□□ 0.32
Slc6a20aQ8VDB9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms