Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc9Q8VC31 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Tgds-204ENSMUST00000228543 1594 ntBASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Gm13241-201ENSMUST00000094493 780 ntBASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc9Q8VC31 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.85■□□□□ 0.93
Ccdc9Q8VC31 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.84■□□□□ 0.93
Ccdc9Q8VC31 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc9Q8VC31 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc9Q8VC31 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc9Q8VC31 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Ccdc9Q8VC31 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc9Q8VC31 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc9Q8VC31 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc9Q8VC31 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc9Q8VC31 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc9Q8VC31 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc9Q8VC31 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms