Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp33Q8R5K2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.89■□□□□ 0.77
Usp33Q8R5K2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp33Q8R5K2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Gm18958-201ENSMUST00000174258 762 ntBASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp33Q8R5K2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Gm27742-201ENSMUST00000184667 60 ntBASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp33Q8R5K2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Gm24589-201ENSMUST00000116692 94 ntBASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp33Q8R5K2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.85■□□□□ 0.77
Usp33Q8R5K2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp33Q8R5K2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Gm37722-201ENSMUST00000193757 208 ntBASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp33Q8R5K2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Gm27357-201ENSMUST00000183754 135 ntBASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Usp33Q8R5K2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms