Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.52■□□□□ 0.4
Slf1Q8R3P9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slf1Q8R3P9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slf1Q8R3P9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slf1Q8R3P9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slf1Q8R3P9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Slf1Q8R3P9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slf1Q8R3P9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slf1Q8R3P9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slf1Q8R3P9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Slf1Q8R3P9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms