Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cgref1Q8R1U2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cgref1Q8R1U2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cgref1Q8R1U2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cgref1Q8R1U2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cgref1Q8R1U2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cgref1Q8R1U2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cgref1Q8R1U2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cgref1Q8R1U2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Gm27454-201ENSMUST00000185090 204 ntBASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cgref1Q8R1U2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cgref1Q8R1U2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cgref1Q8R1U2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cgref1Q8R1U2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cgref1Q8R1U2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cgref1Q8R1U2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms