Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Gm13836-201ENSMUST00000121159 501 ntBASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp40Q8R1F9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpp40Q8R1F9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpp40Q8R1F9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Gm10231-201ENSMUST00000181584 441 ntBASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Gm2274-201ENSMUST00000184539 609 ntBASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Gm10175-202ENSMUST00000208752 441 ntBASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpp40Q8R1F9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Rpp40Q8R1F9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpp40Q8R1F9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms