Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf4Q8K4J2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf4Q8K4J2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf4Q8K4J2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf4Q8K4J2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf4Q8K4J2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Gm9847-201ENSMUST00000052528 599 ntBASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf4Q8K4J2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.82■□□□□ 0.12
Ebf4Q8K4J2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf4Q8K4J2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Mir7075-201ENSMUST00000184187 82 ntBASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf4Q8K4J2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf4Q8K4J2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms