Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col23a1Q8K4G2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col23a1Q8K4G2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Gm23935-201ENSMUST00000102303 57 ntBASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Gm24270-201ENSMUST00000102326 57 ntBASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Gm13186-201ENSMUST00000118031 316 ntBASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Gm24245-201ENSMUST00000157318 57 ntBASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col23a1Q8K4G2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Gm15467-201ENSMUST00000120582 445 ntBASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col23a1Q8K4G2 Phf7-203ENSMUST00000226565 1971 ntBASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Gm13312-201ENSMUST00000119631 718 ntBASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Rprl3-201ENSMUST00000157400 290 ntBASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Mir5126-201ENSMUST00000175513 77 ntBASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Col23a1Q8K4G2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col23a1Q8K4G2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col23a1Q8K4G2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col23a1Q8K4G2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col23a1Q8K4G2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col23a1Q8K4G2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21■□□□□ 0.95
Col23a1Q8K4G2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21■□□□□ 0.95
Col23a1Q8K4G2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21■□□□□ 0.95
Col23a1Q8K4G2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col23a1Q8K4G2 Gm27000-201ENSMUST00000182943 842 ntBASIC21■□□□□ 0.95
Col23a1Q8K4G2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21■□□□□ 0.95
Col23a1Q8K4G2 Gm42670-201ENSMUST00000201816 1292 ntBASIC21■□□□□ 0.95
Col23a1Q8K4G2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21■□□□□ 0.95
Col23a1Q8K4G2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col23a1Q8K4G2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col23a1Q8K4G2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms