Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Gm38027-201ENSMUST00000192315 235 ntBASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn1Q8K0T0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn1Q8K0T0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Gm3375-201ENSMUST00000203929 796 ntBASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Odf3b-204ENSMUST00000227834 930 ntBASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn1Q8K0T0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Gm21814-202ENSMUST00000203277 873 ntBASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn1Q8K0T0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Gm37025-201ENSMUST00000195159 829 ntBASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rtn1Q8K0T0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.92■□□□□ 0.78
Rtn1Q8K0T0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms