Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.43■□□□□ 0.38
Clip4Q8CI96 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Gm15378-201ENSMUST00000121894 207 ntBASIC17.42■□□□□ 0.38
Clip4Q8CI96 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Gm10698-201ENSMUST00000182663 604 ntBASIC17.42■□□□□ 0.38
Clip4Q8CI96 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clip4Q8CI96 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.41■□□□□ 0.38
Clip4Q8CI96 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clip4Q8CI96 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.4■□□□□ 0.38
Clip4Q8CI96 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Gm10138-203ENSMUST00000206952 366 ntBASIC17.4■□□□□ 0.38
Clip4Q8CI96 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.4■□□□□ 0.38
Clip4Q8CI96 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clip4Q8CI96 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Clip4Q8CI96 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clip4Q8CI96 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.38■□□□□ 0.37
Clip4Q8CI96 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clip4Q8CI96 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.37■□□□□ 0.37
Clip4Q8CI96 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms