Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Gm9731-201ENSMUST00000209480 747 ntBASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf31Q8CCF0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Gm45058-201ENSMUST00000205810 766 ntBASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf31Q8CCF0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Mir5130-201ENSMUST00000175160 84 ntBASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf31Q8CCF0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Il3ra-202ENSMUST00000223589 738 ntBASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.91■□□□□ 0.62
Prpf31Q8CCF0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf31Q8CCF0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Prpf31Q8CCF0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf31Q8CCF0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf31Q8CCF0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf31Q8CCF0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms