Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim9Q8C7M3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim9Q8C7M3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim9Q8C7M3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim9Q8C7M3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.08■□□□□ 0.64
Trim9Q8C7M3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim9Q8C7M3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim9Q8C7M3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim9Q8C7M3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Gm22240-201ENSMUST00000175225 82 ntBASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim9Q8C7M3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim9Q8C7M3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Gm12085-201ENSMUST00000119263 940 ntBASIC19.03■□□□□ 0.64
Trim9Q8C7M3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms